BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032E03LP1|AL429578
(690 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1698 1200 0.0
>3x_Contig1698
Length = 21001
Score = 1200 bits (596), Expect = 0.0
Identities = 659/690 (95%)
Strand = Plus / Plus
Query: 1 ttgtagataaggwatggctagattatgagagacaaagagaacagaaaagattagcattca 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16738 ttgtagataaggaatggctagattatgagagacaaagagaacagaaaagattagcattca 16797
Query: 61 aaccttctactgagaagcatgttatcgtagagaaccctggtgaatacaacatcgcagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16798 aaccttctactgagaagcatgttatcgtagagaaccctggtgaatacaacatcgcagcag 16857
Query: 121 aagaaactaaagtcaagagatttttgtagggtgtgccaactaatatctttkttattggtg 180
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 16858 aagaaactaaagtcaagagatttttgtagggtgtgccaactaatatctttgtaattggtg 16917
Query: 181 aaaattgttcacttcatttacatgacttcttaatgaatttttwtgtttatttttwtggtt 240
|||||||||||||||||||||||||||||| ||||||| | | ||| ||| | | |||||
Sbjct: 16918 aaaattgttcacttcatttacatgacttctaaatgaatatatatgtatatatatatggtt 16977
Query: 241 wchacgaatgawacgaaatatatcagaacttaacttcatttgtkacctttgtwtcwtcat 300
| |||||||| ||||||||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 16978 acaacgaatgaaacgaaatatatcagaacttaacttcatttgtgacctttgtatcatcat 17037
Query: 301 ggaccacatccttttcttcgaggggagcgctgccattagaaggagtttttattttkggtc 360
|||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||
Sbjct: 17038 ggaccacatccttttcttcgaggggagcactgccattagaaggagtattaattttgggtc 17097
Query: 361 tcacttcacttcttggtggactctttttcaaatccttacgaggactttcatgggagttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 17098 tcacttcacttcttggtggactctttttcaaatccttacgaggactttcatgggagtgag 17157
Query: 421 ttgttccagttgcactagatggtgttatgggattcttgtttcccttcatcttatcattga 480
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 17158 ttgttccagtagcactagatggtgtaatgggattcttgtttcccttcatcttatcattga 17217
Query: 481 taaccaaagggatagatctctgaggagatttctcctgggaaggaggttctgaagagtggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17218 taaccaaagggatagatctctgaggagatttctcctgggaaggaggttctgaagagtggc 17277
Query: 541 ttgatatatttgttctttgtgtctttkgcgtwttcgaatgtgcctcaagtaattcattca 600
||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||
Sbjct: 17278 ttgatatatttgtactttgagtctttggcgttttcgaatgtgcctcaagtaattcattca 17337
Query: 601 actcagtkaatkaagcagaaggaatgccaggcatgtttgcctgtwaactggttaagcctt 660
||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 17338 actcagtaaatgaagcagaaggaatgccaggcatgtttgcctgtaaactggttaagcctt 17397
Query: 661 gcaaaatttctggaggtagatttttcaatt 690
||||||||||||||||||||||||||||||
Sbjct: 17398 gcaaaatttctggaggtagatttttcaatt 17427
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4774
Number of Sequences: 1807
Number of extensions: 4774
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 690
length of database: 10,358,551
effective HSP length: 16
effective length of query: 674
effective length of database: 10,329,639
effective search space: 6962176686
effective search space used: 6962176686
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)